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Peptide record

TPDB49718

Antifungal standard
72 amino acids
Basic Information
3D PDB MODEL
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TPDB49718
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 72-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
KSCCKSTLGRNCYNLCRARGAQKLCANVCRCKLTSGLSCPKDFPKMGSKGLKGVMVCLLILGLVLEQVQVEG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C328H566N98O93S11
HW
L
7723.36
9.29
12
3
25
+9
0.97
0.169
93.33
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
1990
0.26
23
Residue Composition
number
3
A
4
R
3
N
1
D
9
C
2
E
3
Q
8
G
0
H
1
I
11
L
8
K
2
M
1
F
2
P
5
S
2
T
0
W
1
Y
6
V
Amino Acid Distribution
A: 3 R: 4 N: 3 D: 1 C: 9 E: 2 Q: 3 G: 8 H: 0 I: 1 L: 11 K: 8 M: 2 F: 1 P: 2 S: 5 T: 2 W: 0 Y: 1 V: 6
Chemical Descriptors
72 reviewed residue count
C328H566N98O93S11 sequence-only estimate (linear, free termini)
7723.36 sequence-only estimate (linear, free termini)
9.29 sequence-only estimate (linear, free termini)
+9 sequence-only estimate (linear, free termini)
0.97 sequence-only estimate (linear, free termini)
0.169 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb