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Peptide record

TPDB49717

Antifungal standard
73 amino acids
Basic Information
3D PDB MODEL
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TPDB49717
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 73-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
RTCMIKKEGWGKCLIDTTCAHSCKNRGYIGGNCKGMTRTCYCLVNCMERKTFSFLFLLLLVLASDVAVERGEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C352H574N100O100S11
QP
CL
8159.70
8.51
12
6
28
+5
1.24
0.116
80.14
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
8980
1.10
22
Residue Composition
number
4
A
5
R
3
N
2
D
8
C
4
E
0
Q
7
G
1
H
3
I
8
L
6
K
3
M
3
F
0
P
3
S
6
T
1
W
2
Y
4
V
Amino Acid Distribution
A: 4 R: 5 N: 3 D: 2 C: 8 E: 4 Q: 0 G: 7 H: 1 I: 3 L: 8 K: 6 M: 3 F: 3 P: 0 S: 3 T: 6 W: 1 Y: 2 V: 4
Chemical Descriptors
73 reviewed residue count
C352H574N100O100S11 sequence-only estimate (linear, free termini)
8159.70 sequence-only estimate (linear, free termini)
8.51 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.24 sequence-only estimate (linear, free termini)
0.116 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb