Back to search

Peptide record

TPDB49716

Antifungal standard
80 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49716
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 80-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
QKLCQRPSGTWSGVCGNNNACKNQCIRLEKARHGSCNYVFPAHKCICYFPCMAKFASIIVLLFVALVVFAAFEEPTMVEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C396H615N107O105S10
D
A
8875.49
8.31
10
4
36
+4
0.63
0.321
80.50
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
8980
1.01
24
Residue Composition
number
9
A
3
R
5
N
0
D
8
C
4
E
3
Q
4
G
2
H
4
I
5
L
5
K
2
M
6
F
4
P
4
S
2
T
1
W
2
Y
7
V
Amino Acid Distribution
A: 9 R: 3 N: 5 D: 0 C: 8 E: 4 Q: 3 G: 4 H: 2 I: 4 L: 5 K: 5 M: 2 F: 6 P: 4 S: 4 T: 2 W: 1 Y: 2 V: 7
Chemical Descriptors
80 reviewed residue count
C396H615N107O105S10 sequence-only estimate (linear, free termini)
8875.49 sequence-only estimate (linear, free termini)
8.31 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.63 sequence-only estimate (linear, free termini)
0.321 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb