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Peptide record

TPDB49715

Antifungal standard
80 amino acids
Basic Information
3D PDB MODEL
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TPDB49715
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 80-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
QKLCERPSGTWSGVCGNNNACKNQCINLEKARHGSCNYVFPAHKCICYFPCMAKFASIIALLFAALVLFAAFEAPTMVEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C389H600N104O105S10
D
A
8734.28
8.10
9
4
37
+3
0.48
0.335
78.25
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
8980
1.03
24
Residue Composition
number
12
A
2
R
6
N
0
D
8
C
4
E
2
Q
4
G
2
H
4
I
6
L
5
K
2
M
6
F
4
P
4
S
2
T
1
W
2
Y
4
V
Amino Acid Distribution
A: 12 R: 2 N: 6 D: 0 C: 8 E: 4 Q: 2 G: 4 H: 2 I: 4 L: 6 K: 5 M: 2 F: 6 P: 4 S: 4 T: 2 W: 1 Y: 2 V: 4
Chemical Descriptors
80 reviewed residue count
C389H600N104O105S10 sequence-only estimate (linear, free termini)
8734.28 sequence-only estimate (linear, free termini)
8.10 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.48 sequence-only estimate (linear, free termini)
0.335 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb