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Peptide record

TPDB49712

Antifungal standard
74 amino acids
Basic Information
3D PDB MODEL
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TPDB49712
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 74-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
GTCKAECPTWEGICINKAPCVKCCKAQPEKFTDGHCSKILRRCLCTKPCMARSICFFAVAILALMLFAAYETEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C355H571N95O97S13
C
8138.80
8.08
11
6
30
+4
0.70
0.318
74.05
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
7615
0.94
21
Residue Composition
number
10
A
3
R
1
N
1
D
11
C
5
E
1
Q
3
G
1
H
5
I
5
L
7
K
2
M
4
F
4
P
2
S
5
T
1
W
1
Y
2
V
Amino Acid Distribution
A: 10 R: 3 N: 1 D: 1 C: 11 E: 5 Q: 1 G: 3 H: 1 I: 5 L: 5 K: 7 M: 2 F: 4 P: 4 S: 2 T: 5 W: 1 Y: 1 V: 2
Chemical Descriptors
74 reviewed residue count
C355H571N95O97S13 sequence-only estimate (linear, free termini)
8138.80 sequence-only estimate (linear, free termini)
8.08 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.70 sequence-only estimate (linear, free termini)
0.318 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb