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Peptide record

TPDB49711

Antifungal standard
72 amino acids
Basic Information
3D PDB MODEL
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TPDB49711
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 72-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
ATCKAECPTWDSVCINKKPCVACCKKAKFSDGHCSKILRRCLCTKECMARSICFFAVAILALMLFAAYDAEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C343H555N93O94S13
Q
A
7902.53
8.24
12
6
32
+5
0.78
0.419
77.50
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
7615
0.96
20
Residue Composition
number
12
A
3
R
1
N
3
D
11
C
3
E
0
Q
1
G
1
H
4
I
5
L
8
K
2
M
4
F
2
P
4
S
3
T
1
W
1
Y
3
V
Amino Acid Distribution
A: 12 R: 3 N: 1 D: 3 C: 11 E: 3 Q: 0 G: 1 H: 1 I: 4 L: 5 K: 8 M: 2 F: 4 P: 2 S: 4 T: 3 W: 1 Y: 1 V: 3
Chemical Descriptors
72 reviewed residue count
C343H555N93O94S13 sequence-only estimate (linear, free termini)
7902.53 sequence-only estimate (linear, free termini)
8.24 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
0.78 sequence-only estimate (linear, free termini)
0.419 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb