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Peptide record

TPDB49708

Antifungal standard
80 amino acids
Basic Information
3D PDB MODEL
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TPDB49708
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 80-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
QKLCERPSGTWSGVCGNSNACKNQCINLEKARHGSCNYVFPAHKCICYFPCMAKSATIVTLFFAALVFFAALEAPMVVEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C387H597N103O106S10
D
A
8709.22
8.10
9
4
36
+3
0.51
0.339
74.50
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
8980
1.03
25
Residue Composition
number
11
A
2
R
5
N
0
D
8
C
4
E
2
Q
4
G
2
H
3
I
5
L
5
K
2
M
6
F
4
P
5
S
3
T
1
W
2
Y
6
V
Amino Acid Distribution
A: 11 R: 2 N: 5 D: 0 C: 8 E: 4 Q: 2 G: 4 H: 2 I: 3 L: 5 K: 5 M: 2 F: 6 P: 4 S: 5 T: 3 W: 1 Y: 2 V: 6
Chemical Descriptors
80 reviewed residue count
C387H597N103O106S10 sequence-only estimate (linear, free termini)
8709.22 sequence-only estimate (linear, free termini)
8.10 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.51 sequence-only estimate (linear, free termini)
0.339 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb