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Peptide record

TPDB49707

Antifungal standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB49707
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 17-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
LVYSHTEPIPYPILPQN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C94H141N21O26
ARDCGKMFW
P
1981.28
5.13
1
1
7
-1
0.36
-0.200
108.82
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
2980
1.50
6
Residue Composition
number
0
A
0
R
1
N
0
D
0
C
1
E
1
Q
0
G
1
H
2
I
2
L
0
K
0
M
0
F
4
P
1
S
1
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 0 C: 0 E: 1 Q: 1 G: 0 H: 1 I: 2 L: 2 K: 0 M: 0 F: 0 P: 4 S: 1 T: 1 W: 0 Y: 2 V: 1
Chemical Descriptors
17 reviewed residue count
C94H141N21O26 sequence-only estimate (linear, free termini)
1981.28 sequence-only estimate (linear, free termini)
5.13 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
0.36 sequence-only estimate (linear, free termini)
-0.200 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb