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Peptide record

TPDB49706

Antifungal standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB49706
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 15-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
AHPSSYDTPASEDGG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C61H87N17O27
RNCQILKMFWV
S
1490.46
3.70
1
3
3
-3
2.42
-1.233
13.33
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
1490
1.00
5
Residue Composition
number
2
A
0
R
0
N
2
D
0
C
1
E
0
Q
2
G
1
H
0
I
0
L
0
K
0
M
0
F
2
P
3
S
1
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 2 C: 0 E: 1 Q: 0 G: 2 H: 1 I: 0 L: 0 K: 0 M: 0 F: 0 P: 2 S: 3 T: 1 W: 0 Y: 1 V: 0
Chemical Descriptors
15 reviewed residue count
C61H87N17O27 sequence-only estimate (linear, free termini)
1490.46 sequence-only estimate (linear, free termini)
3.70 sequence-only estimate (linear, free termini)
-3 sequence-only estimate (linear, free termini)
2.42 sequence-only estimate (linear, free termini)
-1.233 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb