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Peptide record

TPDB49672

Antifungal standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB49672
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 13-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
VTITVVVFVARYM
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C71H116N16O17S1
NDCEQGHLKPSW
V
1497.86
9.88
1
0
10
+1
-0.93
1.908
149.23
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
1490
0.99
3
Residue Composition
number
1
A
1
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
0
L
0
K
1
M
1
F
0
P
0
S
2
T
0
W
1
Y
5
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 0 M: 1 F: 1 P: 0 S: 0 T: 2 W: 0 Y: 1 V: 5
Chemical Descriptors
13 reviewed residue count
C71H116N16O17S1 sequence-only estimate (linear, free termini)
1497.86 sequence-only estimate (linear, free termini)
9.88 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.93 sequence-only estimate (linear, free termini)
1.908 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb