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Peptide record

TPDB49666

Antifungal standard
38 amino acids
Basic Information
3D PDB MODEL
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TPDB49666
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 38-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
GFGCPFNQGACHGHCRSIRRGGGYCSGFAKQTCTCYRK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C172H261N59O48S6
DELMWV
G
4115.69
9.25
8
0
8
+6
2.04
-0.568
15.53
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
3355
0.82
15
Residue Composition
number
2
A
4
R
1
N
0
D
6
C
0
E
2
Q
8
G
2
H
1
I
0
L
2
K
0
M
3
F
1
P
2
S
2
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 2 R: 4 N: 1 D: 0 C: 6 E: 0 Q: 2 G: 8 H: 2 I: 1 L: 0 K: 2 M: 0 F: 3 P: 1 S: 2 T: 2 W: 0 Y: 2 V: 0
Chemical Descriptors
38 reviewed residue count
C172H261N59O48S6 sequence-only estimate (linear, free termini)
4115.69 sequence-only estimate (linear, free termini)
9.25 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.04 sequence-only estimate (linear, free termini)
-0.568 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb