TPDB

3D PDB MODEL

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TPDB ID TPDB49663

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

CAFPdb Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 35-aa modified antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

CIAKGNGCQPSGVQGNCCSGHCHKEPGWVAGYCKZ

FASTA

>TPDB49663|Antifungal|length=35
CIAKGNGCQPSGVQGNCCSGHCHKEPGWVAGYCKZ

Formula C143H220N46O44S6

Absent Amino Acids RDLMFT

Common Amino Acids G

Mass 3479.96

PI 8.02

Basic Residues 5

Acidic Residues 1

Hydrophobic Residues 7

Net Charge +2

Boman Index 5.40

Hydrophobicity -0.397

Aliphatic Index 33.43

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 211.64

Polar Residues 13

number

2

A

0

R

2

N

0

D

6

C

1

E

2

Q

7

G

2

H

1

I

0

L

3

K

0

M

0

F

2

P

2

S

0

T

1

W

1

Y

2

V

Amino Acid Distribution

A: 2 R: 0 N: 2 D: 0 C: 6 E: 1 Q: 2 G: 7 H: 2 I: 1 L: 0 K: 3 M: 0 F: 0 P: 2 S: 2 T: 0 W: 1 Y: 1 V: 2

Length

35

Formula

C143H220N46O44S6

Mass

3479.96

PI

8.02

Net Charge

+2

Boman Index

5.40

Hydrophobicity

-0.397

Evidence 1 Activity

Source & Reference

Database Source CAFPdb