Back to search

Peptide record

TPDB49653

Antifungal standard
40 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49653
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 40-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
EQCGRQAGGALCPGGQCCSQYGWCGTTNEYCGQGCQSQCG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C159H240N52O59S8
DHIKMFV
G
4080.45
4.26
1
2
6
-1
1.39
-0.605
14.75
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
8980
2.20
22
Residue Composition
number
2
A
1
R
1
N
0
D
8
C
2
E
7
Q
10
G
0
H
0
I
1
L
0
K
0
M
0
F
1
P
2
S
2
T
1
W
2
Y
0
V
Amino Acid Distribution
A: 2 R: 1 N: 1 D: 0 C: 8 E: 2 Q: 7 G: 10 H: 0 I: 0 L: 1 K: 0 M: 0 F: 0 P: 1 S: 2 T: 2 W: 1 Y: 2 V: 0
Chemical Descriptors
40 reviewed residue count
C159H240N52O59S8 sequence-only estimate (linear, free termini)
4080.45 sequence-only estimate (linear, free termini)
4.26 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.39 sequence-only estimate (linear, free termini)
-0.605 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb