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Peptide record

TPDB49646

Antifungal standard
35 amino acids
Basic Information
3D PDB MODEL
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TPDB49646
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 35-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
YKRGGGGWGGGGGWKGGGGGGGGWKGGGGGGKGGG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C124H179N45O37
ANDCEQHILMFPSTV
G
2892.06
11.04
5
0
4
+5
0.17
-0.986
0.00
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
17990
6.22
1
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
26
G
0
H
0
I
0
L
4
K
0
M
0
F
0
P
0
S
0
T
3
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 26 H: 0 I: 0 L: 0 K: 4 M: 0 F: 0 P: 0 S: 0 T: 0 W: 3 Y: 1 V: 0
Chemical Descriptors
35 reviewed residue count
C124H179N45O37 sequence-only estimate (linear, free termini)
2892.06 sequence-only estimate (linear, free termini)
11.04 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
0.17 sequence-only estimate (linear, free termini)
-0.986 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb