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Peptide record

TPDB49639

Antifungal standard
36 amino acids
Basic Information
3D PDB MODEL
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TPDB49639
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 36-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
DNKAKSKKRDKEKPSSGRPGQTNSVPNAAIQVYKED
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C167H280N54O58
CHLMFW
K
3972.39
10.27
9
5
7
+4
3.76
-1.772
35.28
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
1490
0.38
11
Residue Composition
number
3
A
2
R
3
N
3
D
0
C
2
E
2
Q
2
G
0
H
1
I
0
L
7
K
0
M
0
F
3
P
4
S
1
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 3 R: 2 N: 3 D: 3 C: 0 E: 2 Q: 2 G: 2 H: 0 I: 1 L: 0 K: 7 M: 0 F: 0 P: 3 S: 4 T: 1 W: 0 Y: 1 V: 2
Chemical Descriptors
36 reviewed residue count
C167H280N54O58 sequence-only estimate (linear, free termini)
3972.39 sequence-only estimate (linear, free termini)
10.27 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
3.76 sequence-only estimate (linear, free termini)
-1.772 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb