Back to search

Peptide record

TPDB49638

Antifungal standard
51 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49638
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 51-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
NTCQRKSKTWSGPCLNTGNCKNQCISKEPPATFGACHRDGIGFACFCYFNC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C238H361N71O71S8
MV
C
5609.40
8.31
7
2
12
+4
1.72
-0.473
28.82
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
7490
1.34
23
Residue Composition
number
3
A
2
R
5
N
1
D
8
C
1
E
2
Q
5
G
1
H
2
I
1
L
4
K
0
M
4
F
3
P
3
S
4
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 3 R: 2 N: 5 D: 1 C: 8 E: 1 Q: 2 G: 5 H: 1 I: 2 L: 1 K: 4 M: 0 F: 4 P: 3 S: 3 T: 4 W: 1 Y: 1 V: 0
Chemical Descriptors
51 reviewed residue count
C238H361N71O71S8 sequence-only estimate (linear, free termini)
5609.40 sequence-only estimate (linear, free termini)
8.31 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.72 sequence-only estimate (linear, free termini)
-0.473 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb