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Peptide record

TPDB49632

Antifungal standard
50 amino acids
Basic Information
3D PDB MODEL
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TPDB49632
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 50-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
KVCQKRSKTWSGPCLNTGNCKRQCVDVENATFGACHRQGYGFACFCYKKC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C239H372N74O68S8
IM
C
5626.52
8.97
10
2
13
+7
2.02
-0.574
31.20
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
8980
1.60
21
Residue Composition
number
3
A
3
R
3
N
1
D
8
C
1
E
3
Q
5
G
1
H
0
I
1
L
6
K
0
M
3
F
1
P
2
S
3
T
1
W
2
Y
3
V
Amino Acid Distribution
A: 3 R: 3 N: 3 D: 1 C: 8 E: 1 Q: 3 G: 5 H: 1 I: 0 L: 1 K: 6 M: 0 F: 3 P: 1 S: 2 T: 3 W: 1 Y: 2 V: 3
Chemical Descriptors
50 reviewed residue count
C239H372N74O68S8 sequence-only estimate (linear, free termini)
5626.52 sequence-only estimate (linear, free termini)
8.97 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
2.02 sequence-only estimate (linear, free termini)
-0.574 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb