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Peptide record

TPDB49631

Antifungal standard
50 amino acids
Basic Information
3D PDB MODEL
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TPDB49631
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 50-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
NICKRKSTTWSGPCLNTGNCKNQCINVEHATFGACHQDGFGFACFCYFNC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C237H349N69O70S8
M
C
5541.28
7.85
6
2
14
+2
1.36
-0.228
35.20
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
7490
1.35
23
Residue Composition
number
3
A
1
R
6
N
1
D
8
C
1
E
2
Q
5
G
2
H
2
I
1
L
3
K
0
M
5
F
1
P
2
S
4
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 3 R: 1 N: 6 D: 1 C: 8 E: 1 Q: 2 G: 5 H: 2 I: 2 L: 1 K: 3 M: 0 F: 5 P: 1 S: 2 T: 4 W: 1 Y: 1 V: 1
Chemical Descriptors
50 reviewed residue count
C237H349N69O70S8 sequence-only estimate (linear, free termini)
5541.28 sequence-only estimate (linear, free termini)
7.85 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.36 sequence-only estimate (linear, free termini)
-0.228 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb