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Peptide record

TPDB49622

Antifungal standard
48 amino acids
Basic Information
3D PDB MODEL
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TPDB49622
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 48-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
GRRCESQSHKFKGPCVSDSNCGSVCRGEGFIGGDCRGVRHRCFCTRNC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C209H336N78O66S8
ALMWY
CG
5253.93
8.53
11
4
7
+5
3.14
-0.712
26.25
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
500
0.10
17
Residue Composition
number
0
A
7
R
2
N
2
D
8
C
2
E
1
Q
8
G
2
H
1
I
0
L
2
K
0
M
3
F
1
P
5
S
1
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 0 R: 7 N: 2 D: 2 C: 8 E: 2 Q: 1 G: 8 H: 2 I: 1 L: 0 K: 2 M: 0 F: 3 P: 1 S: 5 T: 1 W: 0 Y: 0 V: 3
Chemical Descriptors
48 reviewed residue count
C209H336N78O66S8 sequence-only estimate (linear, free termini)
5253.93 sequence-only estimate (linear, free termini)
8.53 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
3.14 sequence-only estimate (linear, free termini)
-0.712 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb