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Peptide record

TPDB49580

Antifungal standard
47 amino acids
Basic Information
3D PDB MODEL
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TPDB49580
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 47-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
RTCDSQSHRFKGTCVTHINCAAVCHTDGFHGRNCRGFRRPCFCTKHC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C220H342N80O62S8
ELMWY
C
5356.11
8.77
13
2
9
+6
2.92
-0.615
24.89
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
500
0.09
18
Residue Composition
number
2
A
6
R
2
N
2
D
8
C
0
E
1
Q
4
G
5
H
1
I
0
L
2
K
0
M
4
F
1
P
2
S
5
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 2 R: 6 N: 2 D: 2 C: 8 E: 0 Q: 1 G: 4 H: 5 I: 1 L: 0 K: 2 M: 0 F: 4 P: 1 S: 2 T: 5 W: 0 Y: 0 V: 2
Chemical Descriptors
47 reviewed residue count
C220H342N80O62S8 sequence-only estimate (linear, free termini)
5356.11 sequence-only estimate (linear, free termini)
8.77 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.92 sequence-only estimate (linear, free termini)
-0.615 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb