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Peptide record

TPDB49556

Antifungal standard
247 amino acids
Basic Information
3D PDB MODEL
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TPDB49556
Antifungal
Anti-infective peptides
CAFPdb dbAMP
standard
No
A 247-aa standard-residue antifungal peptide sequence curated from CAFPdb and dbAMP, with an available 3D structural model.
Sequence
MGYLRSSFVFFLLTFVTYTYATSFEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTSMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALNQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHSIQCTANINGECPAALRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKQRCPDAYSYPQDDPTSTFTCPSDSTNYRVVFCPNGVTSPNFPLEMPSSTDEVAK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C1175H1760N322O361S20
G
26814.04
6.56
18
17
79
-1
1.47
-0.315
49.76
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
41910
1.56
95
Residue Composition
number
14
A
12
R
17
N
11
D
16
C
6
E
10
Q
26
G
1
H
7
I
12
L
5
K
4
M
16
F
21
P
18
S
25
T
5
W
9
Y
12
V
Amino Acid Distribution
A: 14 R: 12 N: 17 D: 11 C: 16 E: 6 Q: 10 G: 26 H: 1 I: 7 L: 12 K: 5 M: 4 F: 16 P: 21 S: 18 T: 25 W: 5 Y: 9 V: 12
Chemical Descriptors
247 reviewed residue count
C1175H1760N322O361S20 sequence-only estimate (linear, free termini)
26814.04 sequence-only estimate (linear, free termini)
6.56 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.47 sequence-only estimate (linear, free termini)
-0.315 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.