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Peptide record

TPDB49555

Antifungal standard
225 amino acids
Basic Information
3D PDB MODEL
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TPDB49555
Antifungal
Anti-infective peptides
CAFPdb dbAMP
standard
No
A 225-aa standard-residue antifungal peptide sequence curated from CAFPdb and dbAMP, with an available 3D structural model.
Sequence
MASTRVLHLIALVLAVATAADAATITVVNRCSYTVWPGALPGGGVRLDPGQSWALNMPAGTAGARVWPRTGCTFDGSGRGRCITGDCGGTLACRVSGQQPTTLAEYTLGQGGNKDFFDLSVIDGFNVPMNFEPVGGSCRAARCATDITKECLKELQVPGGCASACGKFGGDTYCCRGQFEHNCPPTNYSKFFKGKCPDAYSYAKDDQTSTFTCPAGTNYQIVLCP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C1024H1589N289O315S19
G
23597.77
7.49
21
17
80
+1
1.15
-0.079
62.93
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
27930
1.18
71
Residue Composition
number
23
A
11
R
8
N
12
D
16
C
5
E
8
Q
29
G
2
H
6
I
14
L
8
K
3
M
10
F
14
P
11
S
21
T
3
W
7
Y
14
V
Amino Acid Distribution
A: 23 R: 11 N: 8 D: 12 C: 16 E: 5 Q: 8 G: 29 H: 2 I: 6 L: 14 K: 8 M: 3 F: 10 P: 14 S: 11 T: 21 W: 3 Y: 7 V: 14
Chemical Descriptors
225 reviewed residue count
C1024H1589N289O315S19 sequence-only estimate (linear, free termini)
23597.77 sequence-only estimate (linear, free termini)
7.49 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.15 sequence-only estimate (linear, free termini)
-0.079 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.