Back to search

Peptide record

TPDB49546

Antifungal standard
239 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49546
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 239-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
AEETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDSNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVGDTTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSWSFASKLAG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C1162H1767N277O352
CM
AS
25249.46
4.27
14
22
114
-10
0.49
0.345
95.10
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
33920
1.34
68
Residue Composition
number
28
A
3
R
9
N
13
D
0
C
9
E
3
Q
17
G
2
H
13
I
21
L
9
K
0
M
17
F
12
P
28
S
20
T
4
W
8
Y
23
V
Amino Acid Distribution
A: 28 R: 3 N: 9 D: 13 C: 0 E: 9 Q: 3 G: 17 H: 2 I: 13 L: 21 K: 9 M: 0 F: 17 P: 12 S: 28 T: 20 W: 4 Y: 8 V: 23
Chemical Descriptors
239 reviewed residue count
C1162H1767N277O352 sequence-only estimate (linear, free termini)
25249.46 sequence-only estimate (linear, free termini)
4.27 sequence-only estimate (linear, free termini)
-10 sequence-only estimate (linear, free termini)
0.49 sequence-only estimate (linear, free termini)
0.345 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb