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Peptide record

TPDB49534

Antifungal standard
221 amino acids
Basic Information
3D PDB MODEL
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TPDB49534
Antifungal
Anti-infective peptides
CAFPdb dbAMP
standard
No
A 221-aa standard-residue antifungal peptide sequence curated from CAFPdb and dbAMP, with an available 3D structural model.
Sequence
AKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C1017H1579N283O322S17
H
A
23467.45
7.97
19
14
78
+4
1.39
-0.171
58.82
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
29420
1.25
88
Residue Composition
number
26
A
9
R
12
N
11
D
16
C
3
E
10
Q
16
G
0
H
7
I
10
L
10
K
1
M
10
F
14
P
17
S
25
T
3
W
8
Y
13
V
Amino Acid Distribution
A: 26 R: 9 N: 12 D: 11 C: 16 E: 3 Q: 10 G: 16 H: 0 I: 7 L: 10 K: 10 M: 1 F: 10 P: 14 S: 17 T: 25 W: 3 Y: 8 V: 13
Chemical Descriptors
221 reviewed residue count
C1017H1579N283O322S17 sequence-only estimate (linear, free termini)
23467.45 sequence-only estimate (linear, free termini)
7.97 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.39 sequence-only estimate (linear, free termini)
-0.171 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.