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Peptide record

TPDB49533

Antifungal standard
255 amino acids
Basic Information
3D PDB MODEL
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TPDB49533
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 255-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
AAKMAKNVDKPLFTATFNVQASSADYATFIAGIRNKLRNPAHFSHNEPVLPPVEPNVPPSRWFHVVLKASPTSAGLTLAIRADNIYLEGFKSSDGTWWELTPGLIPGATYVGFGGTYRDLLGDTDKLTNVALGRQQLEDAVTALHGRTKADKASGPKQQQAREAVTTLLLMVNEATRFQTVSGFVAGLLHPKAVEKKSGKIGNEMKAQVNGWQDLSAALLKTDVKPPPGKSPAKFTPIEKMGVRTAEQAAATLGI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C1226H1952N340O359S4
C
A
27327.29
10.06
35
22
104
+8
1.28
-0.253
81.96
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
27960
1.02
59
Residue Composition
number
32
A
10
R
11
N
11
D
0
C
11
E
10
Q
21
G
5
H
8
I
24
L
20
K
4
M
10
F
18
P
13
S
21
T
4
W
4
Y
18
V
Amino Acid Distribution
A: 32 R: 10 N: 11 D: 11 C: 0 E: 11 Q: 10 G: 21 H: 5 I: 8 L: 24 K: 20 M: 4 F: 10 P: 18 S: 13 T: 21 W: 4 Y: 4 V: 18
Chemical Descriptors
255 reviewed residue count
C1226H1952N340O359S4 sequence-only estimate (linear, free termini)
27327.29 sequence-only estimate (linear, free termini)
10.06 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
1.28 sequence-only estimate (linear, free termini)
-0.253 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb