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Peptide record

TPDB49532

Antifungal standard
201 amino acids
Basic Information
3D PDB MODEL
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TPDB49532
Antifungal
Anti-infective peptides
CAFPdb dbAMP
standard
No
A 201-aa standard-residue antifungal peptide sequence curated from CAFPdb and dbAMP, with an available 3D structural model.
Sequence
ATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C940H1418N266O289S17
H
G
21614.23
7.48
17
15
63
+1
1.53
-0.363
50.05
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
24950
1.15
73
Residue Composition
number
15
A
8
R
20
N
12
D
16
C
3
E
9
Q
24
G
0
H
7
I
9
L
9
K
1
M
15
F
14
P
7
S
16
T
3
W
5
Y
8
V
Amino Acid Distribution
A: 15 R: 8 N: 20 D: 12 C: 16 E: 3 Q: 9 G: 24 H: 0 I: 7 L: 9 K: 9 M: 1 F: 15 P: 14 S: 7 T: 16 W: 3 Y: 5 V: 8
Chemical Descriptors
201 reviewed residue count
C940H1418N266O289S17 sequence-only estimate (linear, free termini)
21614.23 sequence-only estimate (linear, free termini)
7.48 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.53 sequence-only estimate (linear, free termini)
-0.363 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.