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Peptide record

TPDB49530

Antifungal standard
255 amino acids
Basic Information
3D PDB MODEL
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TPDB49530
Antifungal
Anti-infective peptides
CAFPdb dbAMP
standard
No
A 255-aa standard-residue antifungal peptide sequence curated from CAFPdb and dbAMP, with an available 3D structural model.
Sequence
QQCGRQAGNRRCANNLCCSQYGYCGRTNEYCCTSQGCQSQCRRCGVRTVGEIVVGDIGGIISKGMFNNILKHRDDDACEGKGFYTYEAFVAAARSFPAFGSTGDDATRKREIAAFLAQTSHETSAGWPSAPDGPYAWGYCFVRERNPPSKYCDTTTPCPKSYYGRGPIQLTWNYNYEQAGRAIGADLLNNPDLVATDAVISFKTAIWFWMTAQSSKPSCHDVITGSWRPSASDNSVCHVPDYAVVTNIISGEIEY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C1216H1839N349O379S18
AG
27988.17
6.85
28
24
89
-0
1.82
-0.429
56.31
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
54860
1.96
91
Residue Composition
number
24
A
16
R
13
N
14
D
16
C
10
E
11
Q
24
G
4
H
14
I
7
L
8
K
2
M
9
F
13
P
20
S
17
T
6
W
14
Y
13
V
Amino Acid Distribution
A: 24 R: 16 N: 13 D: 14 C: 16 E: 10 Q: 11 G: 24 H: 4 I: 14 L: 7 K: 8 M: 2 F: 9 P: 13 S: 20 T: 17 W: 6 Y: 14 V: 13
Chemical Descriptors
255 reviewed residue count
C1216H1839N349O379S18 sequence-only estimate (linear, free termini)
27988.17 sequence-only estimate (linear, free termini)
6.85 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.82 sequence-only estimate (linear, free termini)
-0.429 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.