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Peptide record

TPDB49526

Antifungal standard
206 amino acids
Basic Information
3D PDB MODEL
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TPDB49526
Antifungal
Anti-infective peptides
CAFPdb dbAMP
standard
No
A 206-aa standard-residue antifungal peptide sequence curated from CAFPdb and dbAMP, with an available 3D structural model.
Sequence
AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C960H1450N276O294S16
M
G
22074.71
7.69
20
16
72
+2
1.58
-0.257
53.54
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
30910
1.40
71
Residue Composition
number
21
A
13
R
13
N
12
D
16
C
4
E
7
Q
22
G
1
H
4
I
7
L
6
K
0
M
12
F
14
P
12
S
14
T
3
W
9
Y
16
V
Amino Acid Distribution
A: 21 R: 13 N: 13 D: 12 C: 16 E: 4 Q: 7 G: 22 H: 1 I: 4 L: 7 K: 6 M: 0 F: 12 P: 14 S: 12 T: 14 W: 3 Y: 9 V: 16
Chemical Descriptors
206 reviewed residue count
C960H1450N276O294S16 sequence-only estimate (linear, free termini)
22074.71 sequence-only estimate (linear, free termini)
7.69 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.58 sequence-only estimate (linear, free termini)
-0.257 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.