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Peptide record

TPDB49504

Antifungal standard
49 amino acids
Basic Information
3D PDB MODEL
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TPDB49504
Antifungal
Anti-infective peptides
Antifungipept CAFPdb dbAMP Peptipedia
standard
No
A 49-aa standard-residue antifungal peptide sequence curated from Antifungipept, CAFPdb, dbAMP, and other sources, with an available 3D structural model.
Sequence
YCERSSGTWSGVCGNTDKCSSQCQRLEGAAHGSCNYVFPAHKCICYYPC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C225H334N66O72S8
M
C
5372.01
7.51
6
3
13
+1
1.62
-0.414
33.88
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
11960
2.23
24
Residue Composition
number
3
A
2
R
2
N
1
D
8
C
2
E
2
Q
5
G
2
H
1
I
1
L
2
K
0
M
1
F
2
P
6
S
2
T
1
W
4
Y
2
V
Amino Acid Distribution
A: 3 R: 2 N: 2 D: 1 C: 8 E: 2 Q: 2 G: 5 H: 2 I: 1 L: 1 K: 2 M: 0 F: 1 P: 2 S: 6 T: 2 W: 1 Y: 4 V: 2
Chemical Descriptors
49 reviewed residue count
C225H334N66O72S8 sequence-only estimate (linear, free termini)
5372.01 sequence-only estimate (linear, free termini)
7.51 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.62 sequence-only estimate (linear, free termini)
-0.414 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.