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Peptide record

TPDB49503

Antifungal standard
49 amino acids
Basic Information
3D PDB MODEL
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TPDB49503
Antifungal
Anti-infective peptides
Antifungipept CAFPdb dbAMP Peptipedia
standard
No
A 49-aa standard-residue antifungal peptide sequence curated from Antifungipept, CAFPdb, dbAMP, and other sources, with an available 3D structural model.
Sequence
YCERSSGTWSGVCGNSGKCSNQCQRLEGAAHGSCNYVFPAHKCICYYPC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C223H331N67O70S8
DM
C
5326.97
7.85
6
2
13
+2
1.51
-0.408
33.88
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
11960
2.25
24
Residue Composition
number
3
A
2
R
3
N
0
D
8
C
2
E
2
Q
6
G
2
H
1
I
1
L
2
K
0
M
1
F
2
P
6
S
1
T
1
W
4
Y
2
V
Amino Acid Distribution
A: 3 R: 2 N: 3 D: 0 C: 8 E: 2 Q: 2 G: 6 H: 2 I: 1 L: 1 K: 2 M: 0 F: 1 P: 2 S: 6 T: 1 W: 1 Y: 4 V: 2
Chemical Descriptors
49 reviewed residue count
C223H331N67O70S8 sequence-only estimate (linear, free termini)
5326.97 sequence-only estimate (linear, free termini)
7.85 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.51 sequence-only estimate (linear, free termini)
-0.408 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.