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Peptide record

TPDB49490

Antifungal standard
33 amino acids
Basic Information
3D PDB MODEL
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TPDB49490
Antifungal
Anti-infective peptides
Antifungipept CAFPdb dbAMP Peptipedia
standard
No
A 33-aa standard-residue antifungal peptide sequence curated from Antifungipept, CAFPdb, dbAMP, and other sources, with an available 3D structural model.
Sequence
VDPDVRAYCKHQCMSTRGDQARKICESVCMRQD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C153H254N52O51S6
NLFW
RDC
3830.38
7.85
7
5
9
+1
3.39
-0.852
44.24
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
1740
0.45
11
Residue Composition
number
2
A
4
R
0
N
4
D
4
C
1
E
3
Q
1
G
1
H
1
I
0
L
2
K
2
M
0
F
1
P
2
S
1
T
0
W
1
Y
3
V
Amino Acid Distribution
A: 2 R: 4 N: 0 D: 4 C: 4 E: 1 Q: 3 G: 1 H: 1 I: 1 L: 0 K: 2 M: 2 F: 0 P: 1 S: 2 T: 1 W: 0 Y: 1 V: 3
Chemical Descriptors
33 reviewed residue count
C153H254N52O51S6 sequence-only estimate (linear, free termini)
3830.38 sequence-only estimate (linear, free termini)
7.85 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
3.39 sequence-only estimate (linear, free termini)
-0.852 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.