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Peptide record

TPDB49449

Antifungal standard
125 amino acids
Basic Information
3D PDB MODEL
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TPDB49449
Antifungal
Anti-infective peptides
Antifungipept CAFPdb dbAMP Peptipedia
standard
No
A 125-aa standard-residue antifungal peptide sequence curated from Antifungipept, CAFPdb, dbAMP, and other sources, with an available 3D structural model.
Sequence
QQATNVRATYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSKYGWTAFCGPAGAHGQAACGKCLRVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C601H897N175O182S6
EM
A
13678.16
7.64
13
9
49
+1
1.60
-0.445
61.04
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
38305
2.80
44
Residue Composition
number
17
A
6
R
8
N
9
D
6
C
0
E
9
Q
12
G
3
H
4
I
6
L
4
K
0
M
3
F
5
P
4
S
10
T
5
W
7
Y
7
V
Amino Acid Distribution
A: 17 R: 6 N: 8 D: 9 C: 6 E: 0 Q: 9 G: 12 H: 3 I: 4 L: 6 K: 4 M: 0 F: 3 P: 5 S: 4 T: 10 W: 5 Y: 7 V: 7
Chemical Descriptors
125 reviewed residue count
C601H897N175O182S6 sequence-only estimate (linear, free termini)
13678.16 sequence-only estimate (linear, free termini)
7.64 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.60 sequence-only estimate (linear, free termini)
-0.445 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.