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Peptide record

TPDB49337

Antifungal standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB49337
Antifungal
Anti-infective peptides
Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 16-aa standard-residue antifungal peptide sequence curated from Antifungipept, CAFPdb, DRAMP, and other sources, with an available 3D structural model.
Sequence
GPLQLSWNYNYGAAGK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C80H115N21O23
RDCEHIMFTV
G
1738.92
9.56
1
0
7
+1
0.59
-0.644
61.25
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
8480
4.88
6
Residue Composition
number
2
A
0
R
2
N
0
D
0
C
0
E
1
Q
3
G
0
H
0
I
2
L
1
K
0
M
0
F
1
P
1
S
0
T
1
W
2
Y
0
V
Amino Acid Distribution
A: 2 R: 0 N: 2 D: 0 C: 0 E: 0 Q: 1 G: 3 H: 0 I: 0 L: 2 K: 1 M: 0 F: 0 P: 1 S: 1 T: 0 W: 1 Y: 2 V: 0
Chemical Descriptors
16 reviewed residue count
C80H115N21O23 sequence-only estimate (linear, free termini)
1738.92 sequence-only estimate (linear, free termini)
9.56 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.59 sequence-only estimate (linear, free termini)
-0.644 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.