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Peptide record

TPDB49249

Antifungal standard
52 amino acids
Basic Information
3D PDB MODEL
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TPDB49249
Antifungal
Anti-infective peptides
Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 52-aa standard-residue antifungal peptide sequence curated from Antifungipept, CAFPdb, DRAMP, and other sources, with an available 3D structural model.
Sequence
DVLVSSVIETSKNDVCFIPCTRRYGDWECYDDCLGKNFNDGGCVDGRCCCKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C244H379N69O81S8
AQHM
C
5831.59
4.51
7
9
14
-2
2.19
-0.362
57.88
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
8980
1.54
18
Residue Composition
number
0
A
3
R
3
N
7
D
8
C
2
E
0
Q
5
G
0
H
2
I
2
L
4
K
0
M
2
F
1
P
3
S
2
T
1
W
2
Y
5
V
Amino Acid Distribution
A: 0 R: 3 N: 3 D: 7 C: 8 E: 2 Q: 0 G: 5 H: 0 I: 2 L: 2 K: 4 M: 0 F: 2 P: 1 S: 3 T: 2 W: 1 Y: 2 V: 5
Chemical Descriptors
52 reviewed residue count
C244H379N69O81S8 sequence-only estimate (linear, free termini)
5831.59 sequence-only estimate (linear, free termini)
4.51 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
2.19 sequence-only estimate (linear, free termini)
-0.362 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.