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Peptide record

TPDB49245

Antifungal standard
44 amino acids
Basic Information
3D PDB MODEL
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TPDB49245
Antifungal
Anti-infective peptides
Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 44-aa standard-residue antifungal peptide sequence curated from Antifungipept, CAFPdb, DRAMP, and other sources, with an available 3D structural model.
Sequence
DCLSGRYRGSCAVWHRKKCVDICQREGRTSGHCSPSLKCWCEGC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C203H323N69O61S8
NMF
C
4962.70
8.32
10
4
9
+4
2.56
-0.618
42.05
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
12990
2.62
16
Residue Composition
number
1
A
5
R
0
N
2
D
8
C
2
E
1
Q
5
G
2
H
1
I
2
L
3
K
0
M
0
F
1
P
5
S
1
T
2
W
1
Y
2
V
Amino Acid Distribution
A: 1 R: 5 N: 0 D: 2 C: 8 E: 2 Q: 1 G: 5 H: 2 I: 1 L: 2 K: 3 M: 0 F: 0 P: 1 S: 5 T: 1 W: 2 Y: 1 V: 2
Chemical Descriptors
44 reviewed residue count
C203H323N69O61S8 sequence-only estimate (linear, free termini)
4962.70 sequence-only estimate (linear, free termini)
8.32 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.56 sequence-only estimate (linear, free termini)
-0.618 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.