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Peptide record

TPDB49218

Antifungal standard
50 amino acids
Basic Information
3D PDB MODEL
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TPDB49218
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 50-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
GATIKKCVVDVKLSKPCTFQECQPLCLQKYNGNGLCPGDDNNICACVYNC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C229H369N63O72S8
RHMW
C
5413.31
7.48
5
4
15
+1
1.06
-0.106
74.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
3480
0.64
21
Residue Composition
number
2
A
0
R
5
N
3
D
8
C
1
E
3
Q
4
G
0
H
2
I
4
L
5
K
0
M
1
F
3
P
1
S
2
T
0
W
2
Y
4
V
Amino Acid Distribution
A: 2 R: 0 N: 5 D: 3 C: 8 E: 1 Q: 3 G: 4 H: 0 I: 2 L: 4 K: 5 M: 0 F: 1 P: 3 S: 1 T: 2 W: 0 Y: 2 V: 4
Chemical Descriptors
50 reviewed residue count
C229H369N63O72S8 sequence-only estimate (linear, free termini)
5413.31 sequence-only estimate (linear, free termini)
7.48 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.06 sequence-only estimate (linear, free termini)
-0.106 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.