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Peptide record

TPDB49217

Antifungal standard
56 amino acids
Basic Information
3D PDB MODEL
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TPDB49217
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 56-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
FSPEDCLDDVGWILICTKPTCKFSCWTSRSVNKGRKMQDYWCSDSNTCHCVFCTGD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C275H412N74O86S9
A
C
6419.28
5.43
7
7
15
-1
1.87
-0.357
43.39
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
18490
2.88
23
Residue Composition
number
0
A
2
R
2
N
6
D
8
C
1
E
1
Q
3
G
1
H
2
I
2
L
4
K
1
M
3
F
2
P
6
S
5
T
3
W
1
Y
3
V
Amino Acid Distribution
A: 0 R: 2 N: 2 D: 6 C: 8 E: 1 Q: 1 G: 3 H: 1 I: 2 L: 2 K: 4 M: 1 F: 3 P: 2 S: 6 T: 5 W: 3 Y: 1 V: 3
Chemical Descriptors
56 reviewed residue count
C275H412N74O86S9 sequence-only estimate (linear, free termini)
6419.28 sequence-only estimate (linear, free termini)
5.43 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.87 sequence-only estimate (linear, free termini)
-0.357 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.