Back to search

Peptide record

TPDB49197

Antifungal standard
63 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49197
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 63-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
DSECLKEYGGDVGFPFCAPRIFPTICYTRCRENKGAKGGRCIWGEGTNVKCLCDYCNDSPFDQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C303H456N84O94S8
HM
CG
7035.94
4.97
8
9
17
-1
1.98
-0.522
43.33
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
10470
1.49
20
Residue Composition
number
2
A
4
R
3
N
5
D
8
C
4
E
1
Q
8
G
0
H
3
I
2
L
4
K
0
M
4
F
4
P
2
S
3
T
1
W
3
Y
2
V
Amino Acid Distribution
A: 2 R: 4 N: 3 D: 5 C: 8 E: 4 Q: 1 G: 8 H: 0 I: 3 L: 2 K: 4 M: 0 F: 4 P: 4 S: 2 T: 3 W: 1 Y: 3 V: 2
Chemical Descriptors
63 reviewed residue count
C303H456N84O94S8 sequence-only estimate (linear, free termini)
7035.94 sequence-only estimate (linear, free termini)
4.97 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.98 sequence-only estimate (linear, free termini)
-0.522 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.