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Peptide record

TPDB49141

Antifungal standard
58 amino acids
Basic Information
3D PDB MODEL
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TPDB49141
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 58-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RELAGVNEIFEIAARSSNNAGTARALQQAPPCKRDVDCSFECPKGGFCNDRLGTCDCF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C261H413N81O86S6
HMWY
A
6254.00
4.93
7
8
18
-1
2.26
-0.384
55.69
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
375
0.06
17
Residue Composition
number
7
A
5
R
4
N
4
D
6
C
4
E
2
Q
5
G
0
H
2
I
3
L
2
K
0
M
4
F
3
P
3
S
2
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 7 R: 5 N: 4 D: 4 C: 6 E: 4 Q: 2 G: 5 H: 0 I: 2 L: 3 K: 2 M: 0 F: 4 P: 3 S: 3 T: 2 W: 0 Y: 0 V: 2
Chemical Descriptors
58 reviewed residue count
C261H413N81O86S6 sequence-only estimate (linear, free termini)
6254.00 sequence-only estimate (linear, free termini)
4.93 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
2.26 sequence-only estimate (linear, free termini)
-0.384 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.