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Peptide record

TPDB49130

Antifungal standard
51 amino acids
Basic Information
3D PDB MODEL
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TPDB49130
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 51-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
EEKQCYDYLLTPQENCEGLICAHECTMQHGGNGVCVDTTSTVCICTYDCTS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C229H355N61O85S9
RFW
C
5611.24
3.88
3
8
13
-7
1.48
-0.249
57.25
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
4970
0.89
25
Residue Composition
number
1
A
0
R
2
N
3
D
8
C
5
E
3
Q
4
G
2
H
2
I
3
L
1
K
1
M
0
F
1
P
2
S
7
T
0
W
3
Y
3
V
Amino Acid Distribution
A: 1 R: 0 N: 2 D: 3 C: 8 E: 5 Q: 3 G: 4 H: 2 I: 2 L: 3 K: 1 M: 1 F: 0 P: 1 S: 2 T: 7 W: 0 Y: 3 V: 3
Chemical Descriptors
51 reviewed residue count
C229H355N61O85S9 sequence-only estimate (linear, free termini)
5611.24 sequence-only estimate (linear, free termini)
3.88 sequence-only estimate (linear, free termini)
-7 sequence-only estimate (linear, free termini)
1.48 sequence-only estimate (linear, free termini)
-0.249 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.