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Peptide record

TPDB49126

Antifungal standard
53 amino acids
Basic Information
3D PDB MODEL
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TPDB49126
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 53-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
VVPSSFKRVEGPVTAASADFCYKCSRGCYRRYRRPVFCQGSICRCSSFIDDGY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C260H399N77O75S6
NHLMW
RS
5995.86
8.85
9
4
18
+5
2.30
-0.247
47.74
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
6335
1.06
19
Residue Composition
number
3
A
7
R
0
N
3
D
6
C
1
E
1
Q
4
G
0
H
2
I
0
L
2
K
0
M
4
F
3
P
7
S
1
T
0
W
4
Y
5
V
Amino Acid Distribution
A: 3 R: 7 N: 0 D: 3 C: 6 E: 1 Q: 1 G: 4 H: 0 I: 2 L: 0 K: 2 M: 0 F: 4 P: 3 S: 7 T: 1 W: 0 Y: 4 V: 5
Chemical Descriptors
53 reviewed residue count
C260H399N77O75S6 sequence-only estimate (linear, free termini)
5995.86 sequence-only estimate (linear, free termini)
8.85 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.30 sequence-only estimate (linear, free termini)
-0.247 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.