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Peptide record

TPDB49084

Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB49084
Antifungal
Anti-infective peptides
AFP-GFuse
standard
No
A 18-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, with an available 3D structural model.
Sequence
AATKFDFFTLALQAPAAF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C94H136N20O24
RNCEGHIMSWYV
A
1930.23
6.75
1
1
12
-0
-0.43
0.872
76.67
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
6
A
0
R
0
N
1
D
0
C
0
E
1
Q
0
G
0
H
0
I
2
L
1
K
0
M
4
F
1
P
0
S
2
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 6 R: 0 N: 0 D: 1 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 0 L: 2 K: 1 M: 0 F: 4 P: 1 S: 0 T: 2 W: 0 Y: 0 V: 0
Chemical Descriptors
18 reviewed residue count
C94H136N20O24 sequence-only estimate (linear, free termini)
1930.23 sequence-only estimate (linear, free termini)
6.75 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
-0.43 sequence-only estimate (linear, free termini)
0.872 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA