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Peptide record

TPDB49068

Antifungal standard
56 amino acids
Basic Information
3D PDB MODEL
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TPDB49068
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 56-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RETRMMEQTCPVFWPMVPCDANKCEQMCRDYYGSVPSYCNRIGTPIAECACSLTPC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C268H416N74O83S12
H
C
6387.42
4.84
5
6
18
-1
1.71
-0.288
41.79
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
10470
1.64
22
Residue Composition
number
3
A
4
R
2
N
2
D
8
C
4
E
2
Q
2
G
0
H
2
I
1
L
1
K
4
M
1
F
6
P
3
S
4
T
1
W
3
Y
3
V
Amino Acid Distribution
A: 3 R: 4 N: 2 D: 2 C: 8 E: 4 Q: 2 G: 2 H: 0 I: 2 L: 1 K: 1 M: 4 F: 1 P: 6 S: 3 T: 4 W: 1 Y: 3 V: 3
Chemical Descriptors
56 reviewed residue count
C268H416N74O83S12 sequence-only estimate (linear, free termini)
6387.42 sequence-only estimate (linear, free termini)
4.84 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.71 sequence-only estimate (linear, free termini)
-0.288 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.