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Peptide record

TPDB49064

Antifungal standard
50 amino acids
Basic Information
3D PDB MODEL
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TPDB49064
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 50-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
KSMNPTGRRCPDPNGVEKKSMCYSSCKTQGFMGGSCQGHKGNYMCECYEG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C222H348N68O74S10
AILW
G
5474.22
8.30
8
4
9
+3
2.27
-1.018
5.80
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
4845
0.89
21
Residue Composition
number
0
A
2
R
3
N
1
D
6
C
3
E
2
Q
8
G
1
H
0
I
0
L
5
K
4
M
1
F
3
P
5
S
2
T
0
W
3
Y
1
V
Amino Acid Distribution
A: 0 R: 2 N: 3 D: 1 C: 6 E: 3 Q: 2 G: 8 H: 1 I: 0 L: 0 K: 5 M: 4 F: 1 P: 3 S: 5 T: 2 W: 0 Y: 3 V: 1
Chemical Descriptors
50 reviewed residue count
C222H348N68O74S10 sequence-only estimate (linear, free termini)
5474.22 sequence-only estimate (linear, free termini)
8.30 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
2.27 sequence-only estimate (linear, free termini)
-1.018 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.