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Peptide record

TPDB49057

Antifungal standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB49057
Antifungal
Anti-infective peptides
AFP-GFuse
standard
No
A 20-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, with an available 3D structural model.
Sequence
PDPAKTAPKKGSKKAVTKAA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H156N26O26
RNCEQHILMFWY
K
1994.37
10.82
6
1
6
+5
1.83
-1.055
39.50
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
0
0.00
3
Residue Composition
number
5
A
0
R
0
N
1
D
0
C
0
E
0
Q
1
G
0
H
0
I
0
L
6
K
0
M
0
F
3
P
1
S
2
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 5 R: 0 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 0 K: 6 M: 0 F: 0 P: 3 S: 1 T: 2 W: 0 Y: 0 V: 1
Chemical Descriptors
20 reviewed residue count
C88H156N26O26 sequence-only estimate (linear, free termini)
1994.37 sequence-only estimate (linear, free termini)
10.82 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.83 sequence-only estimate (linear, free termini)
-1.055 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA