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Peptide record

TPDB49053

Antifungal standard
35 amino acids
Basic Information
3D PDB MODEL
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TPDB49053
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 35-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
GPIQISYNYNYGPCGRYCGILGVSPGDNLDCGNQR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C161H243N47O52S3
AEHKMFTW
G
3765.16
6.00
2
2
10
-0
1.52
-0.531
64.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6085
1.62
15
Residue Composition
number
0
A
2
R
4
N
2
D
3
C
0
E
2
Q
7
G
0
H
3
I
2
L
0
K
0
M
0
F
3
P
2
S
0
T
0
W
4
Y
1
V
Amino Acid Distribution
A: 0 R: 2 N: 4 D: 2 C: 3 E: 0 Q: 2 G: 7 H: 0 I: 3 L: 2 K: 0 M: 0 F: 0 P: 3 S: 2 T: 0 W: 0 Y: 4 V: 1
Chemical Descriptors
35 reviewed residue count
C161H243N47O52S3 sequence-only estimate (linear, free termini)
3765.16 sequence-only estimate (linear, free termini)
6.00 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.52 sequence-only estimate (linear, free termini)
-0.531 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.