Back to search

Peptide record

TPDB49051

Antifungal standard
56 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49051
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 56-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
YEDSCSTDEECRRNCLCDVAYCDKSRDKCDYGFMNRVDVRFPKHPYISKNKDGSGR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C273H422N84O92S7
QW
D
6577.28
6.77
12
11
13
-0
3.74
-1.211
31.25
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
6335
0.96
19
Residue Composition
number
1
A
6
R
3
N
8
D
6
C
3
E
0
Q
3
G
1
H
1
I
1
L
5
K
1
M
2
F
2
P
5
S
1
T
0
W
4
Y
3
V
Amino Acid Distribution
A: 1 R: 6 N: 3 D: 8 C: 6 E: 3 Q: 0 G: 3 H: 1 I: 1 L: 1 K: 5 M: 1 F: 2 P: 2 S: 5 T: 1 W: 0 Y: 4 V: 3
Chemical Descriptors
56 reviewed residue count
C273H422N84O92S7 sequence-only estimate (linear, free termini)
6577.28 sequence-only estimate (linear, free termini)
6.77 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
3.74 sequence-only estimate (linear, free termini)
-1.211 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.