TPDB

3D PDB MODEL

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TPDB ID TPDB49036

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 13-aa standard natural antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.

Sequence

MYDESTGYSSALK

FASTA

>TPDB49036|Antifungal|length=13
MYDESTGYSSALK

Formula C62H94N14O24S1

Absent Amino Acids RNCQHIFPWV

Common Amino Acids S

Mass 1451.57

PI 4.07

Basic Residues 1

Acidic Residues 2

Hydrophobic Residues 5

Net Charge -1

Boman Index 1.94

Hydrophobicity -0.731

Aliphatic Index 37.69

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 205.30

Polar Residues 6

number

1

A

0

R

0

N

1

D

0

C

1

E

0

Q

1

G

0

H

0

I

1

L

1

K

1

M

0

F

0

P

3

S

1

T

0

W

2

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 1 C: 0 E: 1 Q: 0 G: 1 H: 0 I: 0 L: 1 K: 1 M: 1 F: 0 P: 0 S: 3 T: 1 W: 0 Y: 2 V: 0

Length

13

Formula

C62H94N14O24S1

Mass

1451.57

PI

4.07

Net Charge

-1

Boman Index

1.94

Hydrophobicity

-0.731

Evidence 1 Activity

Source & Reference

Database Source dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label	Source Definition
Antifungal	dbAMP classified under the Anti-fungal function class.