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Peptide record

TPDB49032

Antifungal standard
63 amino acids
Basic Information
3D PDB MODEL
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TPDB49032
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 63-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
VADYCNRDADCKRVCLRPYACNLTRHLCMCHPNDVSSSKQHCIPEHKGFGEGGPPPQRLKLYR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C305H482N98O88S8
W
C
7186.27
8.42
14
6
17
+4
2.51
-0.768
55.71
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
4845
0.67
19
Residue Composition
number
3
A
6
R
3
N
4
D
7
C
2
E
2
Q
4
G
4
H
1
I
5
L
4
K
1
M
1
F
6
P
3
S
1
T
0
W
3
Y
3
V
Amino Acid Distribution
A: 3 R: 6 N: 3 D: 4 C: 7 E: 2 Q: 2 G: 4 H: 4 I: 1 L: 5 K: 4 M: 1 F: 1 P: 6 S: 3 T: 1 W: 0 Y: 3 V: 3
Chemical Descriptors
63 reviewed residue count
C305H482N98O88S8 sequence-only estimate (linear, free termini)
7186.27 sequence-only estimate (linear, free termini)
8.42 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.51 sequence-only estimate (linear, free termini)
-0.768 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.