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Peptide record

TPDB49018

Antifungal standard
38 amino acids
Basic Information
3D PDB MODEL
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TPDB49018
Antifungal
Anti-infective peptides
AFP-GFuse
standard
No
A 38-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, with an available 3D structural model.
Sequence
ITCGQVTSQVAGCLSYLQRGGAPAPAAAAGIRNLAAMA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C155H260N48O48S3
DEHKFW
A
3660.24
9.09
2
0
19
+2
0.13
0.558
92.89
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
1615
0.44
11
Residue Composition
number
10
A
2
R
1
N
0
D
2
C
0
E
3
Q
5
G
0
H
2
I
3
L
0
K
1
M
0
F
2
P
2
S
2
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 10 R: 2 N: 1 D: 0 C: 2 E: 0 Q: 3 G: 5 H: 0 I: 2 L: 3 K: 0 M: 1 F: 0 P: 2 S: 2 T: 2 W: 0 Y: 1 V: 2
Chemical Descriptors
38 reviewed residue count
C155H260N48O48S3 sequence-only estimate (linear, free termini)
3660.24 sequence-only estimate (linear, free termini)
9.09 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
0.13 sequence-only estimate (linear, free termini)
0.558 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA